Single season effects of mixed-species cover crops on tomato health (cultivar Celebrity) in multi-state field trials

Cover crop use can help mitigate the deleterious effects of common cropping practices (e.g., tillage) and is, therefore, an important component of soil health maintenance. While known to be beneficial in the long-term, the short-term effects of cover crops, specifically mixed-species cover crops in organic systems are less clear. Cover crop effects on tomato productivity and disease severity were recorded over three field seasons (2010, 2011 and 2012) at sixteen field sites in three states, Maryland, New York and Ohio (MD, NY and OH), each with distinct soilborne disease pressure. Plots of five state-specific cover crop treatments were established the season prior to tomato production; the resulting plant residue was incorporated the following spring approximately four weeks before tomato planting. Total fruit yields along with early-season shoot height and fresh weight were used to compare treatment effects on productivity. Treatment disease severity ratings relied on natural inoculum. Interestingly, the effect of a single season of cover cropping on total yield was significant in no more than 25% of all site years. Similarly, cover crop effects on tomato disease levels were significant in 0–44% of the sixteen field sites. However, significant field-specific patterns were observed in every state across multiple years for some treatments. For example, in New York in 2010, tomato yields following all mixed cover crops were greater than the single rye cover crop in one field, but this pattern was reversed in the adjacent field. Thus, no general recommendation of a specific cover crop mixture can be made for near-term enhancement of tomato productivity or for reduction of disease. Therefore, growers should focus on location and operation-specific variables when choosing cover crops.     

Devastation of sesame (Sesamum indicum L.) crops in different agroclimatic zones of India by genetically diverse subgroups of phytoplasma

The sesame crop is highly susceptible to infection by phytoplasmas, a class of cell wall-less plant pathogenic bacteria (Mollicutes), which is responsible for widespread loss of sesame crops in both North and South India in recent years. Therefore, characterizing the pathogen population is required before the control measures can be devised and implemented. With molecular tools based on nested polymerase chain reaction (PCR) assays, sequencing, restriction profiling, and phylogenetic analysis, phyllody-affected sesame plants collected from nine different states of India were found to be infected by phytoplasmas belonging to two 16Sr groups, namely 16SrI and II. Two subgroups of phytoplasma −16SrI-B and 16SrII-D— were prevalent in symptomatic sesame samples collected from North India, whereas phytoplasma of only the 16SrII group was found in South India. However, the latter samples were diverse, belonging to three different subgroups (16SrII-A, II-C, and II-D). In addition, yearly phyllody-affected sesame samples from Delhi for 4 consecutive years (2007–2010) showed variation in the infecting phytoplasma: the subgroup 16SrII-D was detected in samples collected in 2007, and 16SrI-B was predominantly found in the samples collected in the subsequent years. The study also provides molecular evidence for the association between 16SrI-B phytoplasma and different symptoms in sesame crops such as fasciation, little leaf, and stunting. This is the first study to report the association of the phytoplasma subgroups 16SrII-A and II-D with sesame crops in India. This study provides a baseline for designing specific detection and molecular analysis strategies for quarantine purposes. It also highlights the need for examining the dynamics of seasonal or location-specific variation in vector populations to determine the pattern of infection outbreaks.     

Effect of initial hermetic sealing on quality of ‘Kyoho’ grapes during storage

Experiments of initial hermetic sealing using high barrier film were carried out on ‘Kyoho’ grapes (Vitis vinifera L. × V. Labrusca L. cv. Kyoho) in the 2008 and 2009 fruit seasons, to investigate their potential to enhance quality and extend storage life of the fruit. In the 2008 season, grapes were packaged in high barrier film bags for 1, 2, 3, 4 and 5 weeks, and a modified atmosphere (MA) of low oxygen and high carbon dioxide was formed after sealing. After packaging, fruit were removed from bags and stored in air for up to 90 d at 0 °C. In the 2009 season, grapes were packaged in perforated bags, or in high barrier film bags for 2 weeks and subsequently perforated bags to avoid further anoxia and excessive CO₂ accumulation. After treatment, fruit were stored for up to 90 d at 0 °C, followed by shelf-life at 20 °C for 7 d. Non-packaging air storage was used as a control in both seasons. Fruit quality attributes including soluble solids, titratable acidity, stem browning, berry drop and decay incidence were measured. The results indicated that short-term initial MAP (≤2 weeks) had potential for improving appearance of bunches and maintaining the quality of berries during long-term storage, and significantly reduced quality deterioration. Stems were greener and berry drop and decay incidence were more effectively controlled when fruit were sealed in high barrier film bags for 2 weeks and the bags were subsequently perforated.     

QTL analysis of resistance to powdery mildew in hop (<Emphasis Type="Italic">Humulus lupulus</Emphasis> L.)

Hop with powdery mildew [HPM: caused by Podosphaera macularis (Wallr.) U. Braun & S. Takam.] results in significant losses in hop production by reducing yield and quality. One means of increasing yield and quality is the production of resistant hop lines. Breeding for resistance can be significantly improved and accelerated by use of marker-assisted selection. The objective of this preliminary study was to identify QTLs and markers for genetic resistance to HPM. A bi-parental mapping population between the resistant line “Newport” and susceptible line ‘21110M’. Phenotypic data was scored under controlled greenhouse conditions. Significant differences among offspring were observed and disease resistance did not follow a distinct binomial distribution, suggesting quantitative genetic control. Genotyping-by-sequencing resulted in approximately 375 K SNP markers, which were filtered down to 2263 markers mapped to 10 linkage groups. Interval Mapping identified four QTLs with one on linkage group 1 and three located on linkage group 6. Composite interval mapping identified three QTLs, all located on linkage group 6. Mixed linear models identified 15 markers associated with expression of resistance to HPM. Three of these 15 SNPs were also identified in QTL-CIM analysis. Evaluation of the scaffolds containing the significant SNP markers identified seven putative genes—several of which appear involved in disease resistance in other plant species. The SNP markers identified in this study still require validation in unrelated populations prior to implementation in breeding programs.     

Analyzing isolate variability of Macrophomina phaseolina from a regional perspective

Sexton, Z.S., Hughes, T.J., and Wise, K.A. 20XX. Analyzing isolate variability of Macrophomina phaseolina from a regional perspective. Crop Protection. XX:XXXX. Charcoal rot of soybean (Glycine max L.), caused by Macrophomina phaseolina (Tassi) Goid, has been reported more frequently in the north–central United States in recent years. Growth of isolates collected from the northern and southern U.S. was compared in vitro under various incubation temperatures, and isolate pathogenicity was assessed on cultivars adapted to each region. Results indicate that northern isolates had increased growth at 15 °C compared to isolates from southern states, while southern isolates grew 23% more at 40°C compared to northern isolates. Isolates from both regions were pathogenic on charcoal rot resistant and susceptible cultivars adapted for each region. This is the first research to suggest the importance of screening germplasm under regional environmental conditions and with local or regionally adapted isolates when evaluating cultivar resistance to charcoal rot.     

pestMapper—A internet-based software tool for reporting and mapping biological invasions and other geographical and temporal events

An internet-based Google^® Maps application, pestMapper, is developed for sharing biological events such as invasive species and pest distribution over large geographical areas. This data gathering and mapping tool facilitates reporting, viewing, and providing alerts about important pest occurrences and research activities both regionally and globally.This Google^® application provides reported events dynamically to a Google^® Maps interface with detailed information displayed for each event. Users can make use of various built-in options such as region, event, pest, country, or time to display the map selectively. Alerts can be automatically sent to interested parties when system-specified types of events, such as pest outbreaks, occur. The system also generates web-based alerts for certain pre-defined events. A time slider is available for users to view temporal distributions of a biological event.Data are entered using an online data report component. The software can be modified for many other applications, such as species regional or global distribution mapping.     

Yield performance and pest resistance among peanut genotypes when grown without fungicides or insecticides

Yield trials without fungicides or insecticides were conducted four consecutive years (2007–10) at the University of Georgia, Coastal Plain Experiment Station, Tifton Campus to evaluate for peanut (Arachis hypogaea L.) pest resistance. The most endemic diseases in the southeast U.S. are tomato spotted wilt (TSW) caused by Tomato spotted wilt virus, white mold (WM) caused by Sclerotium rolfsii Sacc, and both early and late leaf spot caused by Cercospora arachidicola Hori and Cercosporidium personatum (Berk & Curt.) Deighton, respectively. The most endemic insects are tobacco thrips (Frankliniella fusca Hinds) and potato leafhopper (Empoasca fabae Harris). Results from these replicated field tests showed significant differences (P ≤ 0.05) among advanced Georgia breeding lines and cultivars. Three Georgia cultivars ‘Georgia-01R’, ‘Georgia-05E’, and ‘Georgia-10T’ consistently produced among the best yields with high levels of resistance to TSW, white mold, leafhoppers, and leaf spot each year. Georgia-01R is a multiple-pest-resistant, runner-type cultivar with late maturity; whereas, Georgia-05E is a multiple-pest-resistant, virginia-type cultivar with medium-late maturity. Georgia-10T is a new runner-type cultivar with high level of TSWV and white mold resistance and late-maturity, similar to Georgia-01R, one of its parents. However, Georgia-10T does not appear to have the high level of leaf spot and leafhopper resistance as Georgia-01R, but it still had high yields in the absence of fungicides or insecticides.     

Identification and distribution of fungal pathogens associated with seedling blight of rice in the southern United States

Surveys were conducted in the five southern rice-producing states of Arkansas, Louisiana, Mississippi, Missouri and Texas in the United States during the 2018 and 2019 cropping seasons to determine the distribution and pathogenicity of fungal pathogens associated with seedling blight in rice. A total of 349 pathogenic fungal isolates were collected and identified as belonging to four genera: Rhizoctonia solani, Fusarium spp., Sclerotium rolfsii and Marasmius graminum based on morphological characteristics, molecular analysis and Koch's postulates. R. solani (252 out of 349 pathogenic isolates) was the most prevalent fungus isolated from diseased samples. Of the 252 pathogenic R. solani isolates, 245 were further classified as anastomosis group 11 (AG-11) and 7 as AG-4. Isolates of R. solani AG-4 and M. graminum were the most aggressive, with the highest stand loss (63% to 100%) and median disease rating (DR; 5.0), followed by isolates of R. solani AG-11 (stand loss = 4% to 100% and DR = 0.6 to 5.0), Fusarium spp. (stand loss = 26% to 48% and DR = 2.0 to 5.0) and S. rolfsii (stand loss = 33% to 48% and DR = 2.0 to 3.0) in causing seedling blight in rice. R. solani (62% to 83% of total pathogenic isolates) and Fusarium spp. (10% to 24% of total pathogenic isolates) were predominant in all the five states surveyed. S. rolfsii and M. graminum were present only in Louisiana and Texas. The results of this first systematic survey of rice seedling diseases in the southern United States will help develop effective fungicide seed treatment strategies for control of stand loss caused by seedling blight, one of the major factors limiting rice production.